Get clear answers to frequently asked questions about proprietorship setup, benefits, legal formalities, and compliance—so you can start your business in India with clarity and confidence.
GST Reconciliation refers to the process of matching the data filed by a taxpayer in their GST returns with the data available in the GST portal and the records maintained by their vendors and suppliers. This process ensures that there are no discrepancies in tax liabilities, input tax credit (ITC), and other GST-related data. Timely and accurate GST reconciliation is crucial to claiming eligible ITC, avoiding penalties, and staying compliant with GST laws.
GST is a self-assessed tax regime, and the government relies on the accuracy of the data filed by taxpayers. Any mismatch in data can result in denial of ITC, notices from tax authorities, late fees, or penalties. Regular reconciliation helps:
1. Identify mismatches between GSTR-2A/2B and GSTR-3B
2. Claim accurate Input Tax Credit
3. Prevent duplication or omission of invoices
4. Detect fraudulent or erroneous entries
5. Avoid penalties and interest due to mismatches
6. Maintain good compliance rating with the GST department
GSTR-2A/2B vs GSTR-3B Reconciliation
Compares the input tax credit available in GSTR-2A or 2B with the ITC claimed in GSTR-3B to ensure accurate credit claims.
Purchase Register vs GSTR-2A/2B Reconciliation
Matches your books of accounts (purchase register) with GSTR-2A/2B to identify missing or incorrect invoices from vendors.
GSTR-1 vs GSTR-3B Reconciliation
Ensures the outward supplies reported in GSTR-1 (sales data) matches with the tax paid in GSTR-3B to avoid under or over-payment of tax.
GSTR-3B vs GSTR-9 Reconciliation
Matches monthly returns with annual return to validate yearly data and prepare for GST audit or scrutiny.
Common Reasons for GST Mismatches
– Supplier hasn’t filed GSTR-1, leading to missing invoices in GSTR-2A/2B
– Errors in invoice numbers, dates, or GSTIN
– Incorrect tax amounts entered
– Invoices missed while claiming ITC
– Double claiming of ITC
– Credit claimed for ineligible goods/services
GST Reconciliation Frequency
Ideally, GST reconciliation should be done monthly, soon after filing GSTR-1 and GSTR-3B. However, annual reconciliation is mandatory before filing GSTR-9 to validate the data for the entire financial year.
GST Reconciliation is essential for:
1. Regular taxpayers
2. Businesses with high vendor transactions
3. Entities claiming input tax credit
4. Businesses undergoing GST audit
5. Entities filing annual return (GSTR-9)
6. Any business aiming to maintain a clean GST compliance history
1. Download GSTR-2A or 2B from the GST portal
2. Match the purchase register with 2A/2B data
3. Identify mismatches and classify them (missing invoices, excess credit, etc.)
4. Communicate with vendors to correct discrepancies (if any)
5. Make necessary adjustments before filing GSTR-3B
6. Maintain documentation for audit and compliance purposes
At India Company Setup, we offer end-to-end GST Reconciliation services designed to simplify compliance and safeguard your business from risks. Our experts help you:
1. Accurately reconcile GSTR-2A/2B with purchase records
2. Identify and resolve mismatches quickly
3. Optimize and maximize your ITC claims
4. Communicate effectively with vendors for corrections
5. Maintain proper documentation for GST audit readiness
6. Avoid interest, penalties, and legal issues
Our advanced reconciliation support ensures you stay compliant, reduce tax exposure, and manage GST returns confidently.
India Company Setup simplifies your GST journey. Whether you’re a startup, SME, or large enterprise, our tailored GST reconciliation services help you stay on track with GST compliance—accurately, efficiently, and stress-free.
Contact us today to schedule your GST Reconciliation consultation!
At India Company Setup, we deliver a complete suite of business services to help you start, grow, and manage your company with ease. From registration to regulatory compliance, our expert support ensures your business stays legally sound and financially organized.
Our expert bookkeeping ensures every transaction is correctly recorded, reducing compliance errors and giving you a clear picture of your company’s financial health — crucial for GST, Income Tax, and MCA filings.
Focus on growing your business while we manage your books. By outsourcing to us, you eliminate the burden of paperwork, reconciliations, and regulatory upkeep — saving you both time and effort.
We help you monitor income and expenses in real time, so you maintain a healthy cash position, make informed decisions, and avoid last-minute cash crunches or missed tax deadlines.
GST Reconciliation is the process of matching the data filed by a taxpayer in their GST returns (like GSTR-1, GSTR-3B) with the data uploaded by their suppliers in GSTR-2A or GSTR-2B. It is essential to ensure:
Input Tax Credit (ITC) is accurate and claimable
Compliance with GST laws
Avoidance of penalties or notices from the tax department
GSTR-2A/2B vs. Purchase Register: To verify ITC eligibility
GSTR-1 vs. GSTR-3B: To ensure outward supplies are correctly reported
Books of accounts vs. GST returns: To detect mismatches or errors
Vendor reconciliation: To follow up with suppliers who failed to upload invoices
Ideally, monthly reconciliation is recommended to match data with GSTR-2B for ITC claims. Annual reconciliation is mandatory before filing GSTR-9 (Annual Return) and GSTR-9C (Reconciliation Statement) for applicable taxpayers.
Loss of Input Tax Credit due to unmatched or missing invoices
GST notices and scrutiny from tax authorities
Financial mismatches leading to incorrect tax liabilities
Penalties and interest for wrong claims or under-reporting
Use automated GST reconciliation tools or software
Regularly download GSTR-2A and GSTR-2B
Maintain a clean purchase register with correct GSTINs and invoice data
Follow up with vendors for timely and correct return filing
Get clear answers to frequently asked questions about proprietorship setup, benefits, legal formalities, and compliance—so you can start your business in India with clarity and confidence.
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